Science Gateways Applications Listing

 

ACCESS Science Gateways provide graphical user interfaces to many scientific applications, and can be used by any interested researcher. No personal allocation is required. This page lists ACCESS Science Gateways, indicating which gateways provide access to well-known scientific applications.

Science Gateways Applications Listing

Below is a partial list of applications available through ACCESS science gateways. For a detailed project description, please click on the gateway name in the table. To update the information contained in this table, please contact the ACCESS Help Desk.

Code                                    Domain                                Resource                               Gateway

Gaussian

Computational  Chemistry

Comet, Gordon

GridChem/SEAGrid

LAMMPS

Molecular  Dynamics

Gordon, Stampede, Comet

GridChem/SEAGrid

Abaqus

Finite  Element  Analysis,
Enginnering

Gordon

GridChem/SEAGrid

NWChem

Computational  Chemistry

Stampede, Comet

GridChem/SEAGrid

TINKER  Monte

Computational  Chemistry

Stampede

GridChem/SEAGrid

DFTB+

Computational  Chemistry

Stampede

GridChem/SEAGrid

Molcas

Computational  Chemistry

Stampede

GridChem/SEAGrid

GAMESS

Computational  Chemistry

Comet

GridChem/SEAGrid

Sander  (Amber  Package)

Molecular  Dynamics

Comet

GridChem/SEAGrid

GROMACS  mdrun_mpi

Molecular  Dynamics

Comet

GridChem/SEAGrid

QChem

Computational  Chemistry

Comet

GridChem/SEAGrid

CP2K

Molecular  Dynamics

Comet

GridChem/SEAGrid

Quantum  Espresso

Computational  Chemistry

Comet

GridChem/SEAGrid

DDSCat

Discrete  Dipole  Scattering

Comet

GridChem/SEAGrid

NEK5000

Computional  Fluid
Dynamics

Comet

GridChem/SEAGrid

Brian

Computational
Neuroscience

Stampede, Comet

Neuroscience  Gateway

Freesurfer

Brain  Imaging

Comet

Neuroscience  Gateway

PyMOOSE

Computational
Neuroscience

Comet

Neuroscience  Gateway

NEST

Computational
Neuroscience

Stampede, Comet

Neuroscience  Gateway

NEURON

Computational
Neuroscience

Stampede, Comet

Neuroscience  Gateway

PGenesis

Computational
Neuroscience

Stampede, Comet

Neuroscience  Gateway

PyNN

Computational
Neuroscience

Stampede, Comet

Neuroscience  Gateway

TVB  pipeline

Connectome  pipeline

Comet

Neuroscience  Gateway

BEAST

Phylogenetics

Gordon

CIPRES  Gateway

BEAST2

Phylogenetics

Gordon

CIPRES  Gateway

DPPDiv

Phylogenetics

Gordon

CIPRES  Gateway

FastTree

Phylogenetics

Comet

CIPRES  Gateway

GARLI

Phylogenetics

Comet

CIPRES  Gateway

jModelTest2

Phylogenetics

Gordon

CIPRES  Gateway

MAFFT

Phylogenetics

Gordon

CIPRES  Gateway

MrBayes

Phylogenetics

Gordon

CIPRES  Gateway

Migrate-N

Phylogenetics

Comet

CIPRES  Gateway

PhyloBayes

Phylogenetics

Gordon

CIPRES  Gateway

RAxML

Phylogenetics

Comet

CIPRES  Gateway

TauDEM

Hydrology

Comet, Stampede

CyberGIS

Viewshed

GIS

CyberGIS

pPySAL

GIS

Comet

CyberGIS

pRasterBlaster

GIS  and  Cartography

Comet

CyberGIS

Parallel  Map  Algebra

GIS

CyberGIS

gKDE  (GPU)

GIS

CyberGIS

UltraScan

Analytical Ultracentrifugation  Data
Analysis

Stampede, Comet, Gordon

UltraScan

NLACE

biomechanical  imaging

Gordon

Diagrid

NAMD

Molecular  Dynamics

Stampede

DIagrid

Gromacs

Molecular  Dynamics

Stampede

Diagrid

Blast

Molecular  Biology

Wrangler

Diagrid

WebSLAM

astrophysics

Quarry

Diagrid

SWAT

hydrologic  modeling

Comet

WaterHUB